Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.21■□□□□ 0.51
TOP1P11387 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.21■□□□□ 0.51
TOP1P11387 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.21■□□□□ 0.51
TOP1P11387 SOCS2P1-201ENST00000417727 557 ntBASIC18.21■□□□□ 0.51
TOP1P11387 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 AC007389.4-201ENST00000454674 793 ntBASIC18.21■□□□□ 0.51
TOP1P11387 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.21■□□□□ 0.51
TOP1P11387 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.21■□□□□ 0.51
TOP1P11387 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.21■□□□□ 0.51
TOP1P11387 ENPP7P5-201ENST00000541031 1031 ntBASIC18.21■□□□□ 0.51
TOP1P11387 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.21■□□□□ 0.51
TOP1P11387 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.21■□□□□ 0.51
TOP1P11387 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.21■□□□□ 0.51
TOP1P11387 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.21■□□□□ 0.51
TOP1P11387 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 RPSAP52-203ENST00000622976 1023 ntBASIC18.21■□□□□ 0.51
TOP1P11387 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TOP1P11387 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.21■□□□□ 0.51
TOP1P11387 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TOP1P11387 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 CICP13-201ENST00000422015 2789 ntBASIC18.2■□□□□ 0.5
TOP1P11387 AC068587.6-202ENST00000641839 5619 ntBASIC18.2■□□□□ 0.5
TOP1P11387 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TOP1P11387 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TOP1P11387 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.2■□□□□ 0.5
TOP1P11387 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.2■□□□□ 0.5
TOP1P11387 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.2■□□□□ 0.5
TOP1P11387 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.2■□□□□ 0.5
TOP1P11387 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.2■□□□□ 0.5
TOP1P11387 TTTY23B-201ENST00000442790 549 ntBASIC18.2■□□□□ 0.5
TOP1P11387 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.2■□□□□ 0.5
TOP1P11387 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
TOP1P11387 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.2■□□□□ 0.5
TOP1P11387 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.2■□□□□ 0.5
TOP1P11387 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 GAPDHP40-201ENST00000505218 1006 ntBASIC18.2■□□□□ 0.5
TOP1P11387 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.2■□□□□ 0.5
TOP1P11387 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.2■□□□□ 0.5
TOP1P11387 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.2■□□□□ 0.5
TOP1P11387 AC010319.3-201ENST00000597028 470 ntBASIC18.2■□□□□ 0.5
TOP1P11387 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.2■□□□□ 0.5
TOP1P11387 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TOP1P11387 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.2■□□□□ 0.5
TOP1P11387 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TOP1P11387 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP1P11387 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TOP1P11387 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TOP1P11387 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.2■□□□□ 0.5
TOP1P11387 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TOP1P11387 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.19■□□□□ 0.5
TOP1P11387 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TOP1P11387 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.19■□□□□ 0.5
TOP1P11387 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.19■□□□□ 0.5
TOP1P11387 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TOP1P11387 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.19■□□□□ 0.5
TOP1P11387 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TOP1P11387 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TOP1P11387 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms