Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.64■□□□□ 0.09
THRAP10827 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
THRAP10827 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
THRAP10827 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
THRAP10827 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.64■□□□□ 0.09
THRAP10827 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.64■□□□□ 0.09
THRAP10827 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.64■□□□□ 0.09
THRAP10827 ZNF890P-202ENST00000530367 1156 ntBASIC15.64■□□□□ 0.09
THRAP10827 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.64■□□□□ 0.09
THRAP10827 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.64■□□□□ 0.09
THRAP10827 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THRAP10827 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.64■□□□□ 0.09
THRAP10827 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.64■□□□□ 0.09
THRAP10827 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.63■□□□□ 0.09
THRAP10827 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
THRAP10827 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
THRAP10827 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.63■□□□□ 0.09
THRAP10827 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.63■□□□□ 0.09
THRAP10827 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
THRAP10827 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.63■□□□□ 0.09
THRAP10827 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
THRAP10827 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
THRAP10827 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.63■□□□□ 0.09
THRAP10827 RN7SL618P-201ENST00000477850 296 ntBASIC15.63■□□□□ 0.09
THRAP10827 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.63■□□□□ 0.09
THRAP10827 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.63■□□□□ 0.09
THRAP10827 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.63■□□□□ 0.09
THRAP10827 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.63■□□□□ 0.09
THRAP10827 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
THRAP10827 AC004840.1-201ENST00000636359 365 ntBASIC15.63■□□□□ 0.09
THRAP10827 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.63■□□□□ 0.09
THRAP10827 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.63■□□□□ 0.09
THRAP10827 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.63■□□□□ 0.09
THRAP10827 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
THRAP10827 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.63■□□□□ 0.09
THRAP10827 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THRAP10827 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
THRAP10827 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.62■□□□□ 0.09
THRAP10827 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
THRAP10827 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
THRAP10827 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
THRAP10827 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
THRAP10827 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
THRAP10827 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
THRAP10827 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.62■□□□□ 0.09
THRAP10827 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.62■□□□□ 0.09
THRAP10827 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
THRAP10827 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.62■□□□□ 0.09
THRAP10827 AC023908.3-201ENST00000564211 3047 ntBASIC15.62■□□□□ 0.09
THRAP10827 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
THRAP10827 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
THRAP10827 AC244107.1-201ENST00000442033 332 ntBASIC15.62■□□□□ 0.09
THRAP10827 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
THRAP10827 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.62■□□□□ 0.09
THRAP10827 AC026979.3-201ENST00000607315 403 ntBASIC15.62■□□□□ 0.09
THRAP10827 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.62■□□□□ 0.09
THRAP10827 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms