Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.16□□□□□ -0.46
CD28P10747 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CD28P10747 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.16□□□□□ -0.46
CD28P10747 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
CD28P10747 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
CD28P10747 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 PCDHA1-201ENST00000378133 2726 ntBASIC12.15□□□□□ -0.46
CD28P10747 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CD28P10747 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.15□□□□□ -0.46
CD28P10747 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.15□□□□□ -0.46
CD28P10747 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 FTH1P14-201ENST00000482930 551 ntBASIC12.15□□□□□ -0.46
CD28P10747 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.15□□□□□ -0.46
CD28P10747 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.15□□□□□ -0.46
CD28P10747 AP001582.1-201ENST00000525856 295 ntBASIC12.15□□□□□ -0.46
CD28P10747 RN7SL219P-201ENST00000582872 296 ntBASIC12.15□□□□□ -0.46
CD28P10747 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.15□□□□□ -0.46
CD28P10747 AL596087.1-201ENST00000400979 1969 ntBASIC12.15□□□□□ -0.46
CD28P10747 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
CD28P10747 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.15□□□□□ -0.46
CD28P10747 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.15□□□□□ -0.46
CD28P10747 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.15□□□□□ -0.46
CD28P10747 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD28P10747 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
CD28P10747 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CD28P10747 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
CD28P10747 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CD28P10747 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CD28P10747 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CD28P10747 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.14□□□□□ -0.47
CD28P10747 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.14□□□□□ -0.47
CD28P10747 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 AC011477.6-201ENST00000604980 1927 ntBASIC12.14□□□□□ -0.47
CD28P10747 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 AC092933.1-201ENST00000393644 945 ntBASIC12.14□□□□□ -0.47
CD28P10747 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CD28P10747 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 RPL7P3-201ENST00000441388 714 ntBASIC12.14□□□□□ -0.47
CD28P10747 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 AC012441.1-201ENST00000446669 685 ntBASIC12.14□□□□□ -0.47
CD28P10747 CSF2RBP1-201ENST00000447905 391 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms