Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPRFP10586 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.37■□□□□ 0.37
PTPRFP10586 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 MIR4754-201ENST00000582477 89 ntBASIC17.37■□□□□ 0.37
PTPRFP10586 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.37■□□□□ 0.37
PTPRFP10586 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.37■□□□□ 0.37
PTPRFP10586 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPRFP10586 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
PTPRFP10586 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPRFP10586 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPRFP10586 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PTPRFP10586 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PTPRFP10586 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPRFP10586 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPRFP10586 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.37■□□□□ 0.37
PTPRFP10586 TUBB8P8-201ENST00000458717 1058 ntBASIC17.37■□□□□ 0.37
PTPRFP10586 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 NPM1P43-201ENST00000558669 786 ntBASIC17.37■□□□□ 0.37
PTPRFP10586 DUX4L46-201ENST00000566845 751 ntBASIC17.37■□□□□ 0.37
PTPRFP10586 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPRFP10586 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPRFP10586 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 AC003102.2-201ENST00000589195 1469 ntBASIC17.36■□□□□ 0.37
PTPRFP10586 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPRFP10586 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPRFP10586 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 LINC02199-201ENST00000506655 2702 ntBASIC17.36■□□□□ 0.37
PTPRFP10586 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PTPRFP10586 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 FAM58BP-201ENST00000439056 645 ntBASIC17.36■□□□□ 0.37
PTPRFP10586 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.36■□□□□ 0.37
PTPRFP10586 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.36■□□□□ 0.37
PTPRFP10586 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPRFP10586 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PTPRFP10586 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPRFP10586 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPRFP10586 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPRFP10586 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPRFP10586 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPRFP10586 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPRFP10586 NOC2LP1-201ENST00000450578 752 ntBASIC17.35■□□□□ 0.37
PTPRFP10586 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.35■□□□□ 0.37
PTPRFP10586 AC104784.1-201ENST00000473096 294 ntBASIC17.35■□□□□ 0.37
PTPRFP10586 NDUFS6P1-201ENST00000485187 316 ntBASIC17.35■□□□□ 0.37
PTPRFP10586 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.35■□□□□ 0.37
PTPRFP10586 RTN3P1-201ENST00000536295 711 ntBASIC17.35■□□□□ 0.37
PTPRFP10586 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPRFP10586 SNORD3B-2-202ENST00000571722 791 ntBASIC17.35■□□□□ 0.37
PTPRFP10586 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPRFP10586 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 CAP2P1-201ENST00000557743 1390 ntBASIC17.35■□□□□ 0.37
PTPRFP10586 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPRFP10586 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms