Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 ACKR1-201ENST00000368121 1240 ntBASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 AC012441.1-201ENST00000446669 685 ntBASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 AL355864.2-201ENST00000447420 863 ntBASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 BX539320.1-201ENST00000623759 877 ntBASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRGAP2CP0DJJ0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRGAP2CP0DJJ0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 MIR4259-201ENST00000584466 101 ntBASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 PDIA3P1-201ENST00000471856 1510 ntBASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.01■□□□□ 0.31
SRGAP2CP0DJJ0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRGAP2CP0DJJ0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17■□□□□ 0.31
SRGAP2CP0DJJ0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRGAP2CP0DJJ0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17■□□□□ 0.31
SRGAP2CP0DJJ0 AC090616.6-203ENST00000579186 1945 ntBASIC17■□□□□ 0.31
SRGAP2CP0DJJ0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17■□□□□ 0.31
SRGAP2CP0DJJ0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SRGAP2CP0DJJ0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms