Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
UBCP0CG48 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
UBCP0CG48 FO393414.2-201ENST00000405153 598 ntBASIC13.67□□□□□ -0.22
UBCP0CG48 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.67□□□□□ -0.22
UBCP0CG48 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.67□□□□□ -0.22
UBCP0CG48 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.67□□□□□ -0.22
UBCP0CG48 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
UBCP0CG48 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
UBCP0CG48 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.67□□□□□ -0.22
UBCP0CG48 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.67□□□□□ -0.22
UBCP0CG48 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.67□□□□□ -0.22
UBCP0CG48 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UBCP0CG48 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 FGD5P1-202ENST00000614866 2498 ntBASIC13.66□□□□□ -0.22
UBCP0CG48 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.66□□□□□ -0.22
UBCP0CG48 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.66□□□□□ -0.22
UBCP0CG48 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.66□□□□□ -0.22
UBCP0CG48 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.66□□□□□ -0.22
UBCP0CG48 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.66□□□□□ -0.22
UBCP0CG48 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.66□□□□□ -0.22
UBCP0CG48 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
UBCP0CG48 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.66□□□□□ -0.22
UBCP0CG48 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
UBCP0CG48 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
UBCP0CG48 AC084364.1-201ENST00000551967 1556 ntBASIC13.66□□□□□ -0.22
UBCP0CG48 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UBCP0CG48 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBCP0CG48 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.65□□□□□ -0.22
UBCP0CG48 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.65□□□□□ -0.22
UBCP0CG48 AC067750.1-201ENST00000608826 6545 ntBASIC13.65□□□□□ -0.22
UBCP0CG48 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 AC087386.2-201ENST00000623212 4637 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms