Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AL391069.4-201ENST00000609583 481 ntBASIC16.07■□□□□ 0.16
CD48P09326 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CD48P09326 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CD48P09326 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 FAM45BP-202ENST00000592932 1624 ntBASIC16.07■□□□□ 0.16
CD48P09326 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CD48P09326 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CD48P09326 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.07■□□□□ 0.16
CD48P09326 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.07■□□□□ 0.16
CD48P09326 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CD48P09326 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CD48P09326 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.07■□□□□ 0.16
CD48P09326 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CD48P09326 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CD48P09326 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CD48P09326 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CD48P09326 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.06■□□□□ 0.16
CD48P09326 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.06■□□□□ 0.16
CD48P09326 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.06■□□□□ 0.16
CD48P09326 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.06■□□□□ 0.16
CD48P09326 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.06■□□□□ 0.16
CD48P09326 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CD48P09326 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.06■□□□□ 0.16
CD48P09326 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.06■□□□□ 0.16
CD48P09326 CLK3P2-201ENST00000427566 1453 ntBASIC16.06■□□□□ 0.16
CD48P09326 BTBD7P1-201ENST00000447253 1453 ntBASIC16.06■□□□□ 0.16
CD48P09326 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.06■□□□□ 0.16
CD48P09326 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 GHSR-202ENST00000427970 912 ntBASIC16.06■□□□□ 0.16
CD48P09326 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.06■□□□□ 0.16
CD48P09326 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.06■□□□□ 0.16
CD48P09326 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.06■□□□□ 0.16
CD48P09326 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.06■□□□□ 0.16
CD48P09326 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.06■□□□□ 0.16
CD48P09326 AC104794.3-201ENST00000566840 1248 ntBASIC16.06■□□□□ 0.16
CD48P09326 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.06■□□□□ 0.16
CD48P09326 SRD5A3P1-201ENST00000603021 949 ntBASIC16.06■□□□□ 0.16
CD48P09326 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CD48P09326 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CD48P09326 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CD48P09326 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.06■□□□□ 0.16
CD48P09326 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.06■□□□□ 0.16
CD48P09326 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD48P09326 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CD48P09326 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CD48P09326 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CD48P09326 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 AC093214.1-201ENST00000511688 1107 ntBASIC16.05■□□□□ 0.16
CD48P09326 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 AC000095.1-201ENST00000603208 874 ntBASIC16.05■□□□□ 0.16
CD48P09326 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 ACE3P-201ENST00000423435 1973 ntBASIC16.05■□□□□ 0.16
CD48P09326 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.05■□□□□ 0.16
CD48P09326 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms