Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM3P06753 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.46■□□□□ 0.39
TPM3P06753 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TPM3P06753 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TPM3P06753 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TPM3P06753 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TPM3P06753 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
TPM3P06753 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.46■□□□□ 0.39
TPM3P06753 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM3P06753 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM3P06753 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM3P06753 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.46■□□□□ 0.39
TPM3P06753 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM3P06753 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.46■□□□□ 0.39
TPM3P06753 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM3P06753 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM3P06753 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 REXO1L2P-201ENST00000425429 2069 ntBASIC17.46■□□□□ 0.39
TPM3P06753 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
TPM3P06753 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.46■□□□□ 0.38
TPM3P06753 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TPM3P06753 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TPM3P06753 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.45■□□□□ 0.38
TPM3P06753 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM3P06753 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.45■□□□□ 0.38
TPM3P06753 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TPM3P06753 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TPM3P06753 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.45■□□□□ 0.38
TPM3P06753 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 AL928921.2-201ENST00000641325 2442 ntBASIC17.45■□□□□ 0.38
TPM3P06753 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TPM3P06753 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
TPM3P06753 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TPM3P06753 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.45■□□□□ 0.38
TPM3P06753 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TPM3P06753 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.45■□□□□ 0.38
TPM3P06753 AC098831.1-202ENST00000438821 336 ntBASIC17.45■□□□□ 0.38
TPM3P06753 AC009947.1-201ENST00000444350 727 ntBASIC17.45■□□□□ 0.38
TPM3P06753 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.45■□□□□ 0.38
TPM3P06753 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TPM3P06753 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.45■□□□□ 0.38
TPM3P06753 AC061975.2-201ENST00000581722 295 ntBASIC17.45■□□□□ 0.38
TPM3P06753 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.45■□□□□ 0.38
TPM3P06753 AL450472.2-201ENST00000603663 1156 ntBASIC17.45■□□□□ 0.38
TPM3P06753 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.45■□□□□ 0.38
TPM3P06753 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TPM3P06753 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
TPM3P06753 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TPM3P06753 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM3P06753 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM3P06753 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TPM3P06753 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM3P06753 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM3P06753 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TPM3P06753 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TPM3P06753 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM3P06753 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM3P06753 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms