Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 ZNF259P1-201ENST00000407656 1365 ntBASIC14.72□□□□□ -0.05
MT-ND1P03886 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
MT-ND1P03886 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
MT-ND1P03886 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
MT-ND1P03886 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.71□□□□□ -0.05
MT-ND1P03886 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
MT-ND1P03886 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.71□□□□□ -0.05
MT-ND1P03886 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
MT-ND1P03886 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.71□□□□□ -0.05
MT-ND1P03886 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.71□□□□□ -0.05
MT-ND1P03886 AL645939.2-201ENST00000427340 991 ntBASIC14.71□□□□□ -0.05
MT-ND1P03886 AC112191.1-201ENST00000523689 701 ntBASIC14.71□□□□□ -0.05
MT-ND1P03886 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.71□□□□□ -0.05
MT-ND1P03886 AP002472.1-201ENST00000577490 586 ntBASIC14.71□□□□□ -0.05
MT-ND1P03886 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.71□□□□□ -0.05
MT-ND1P03886 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.71□□□□□ -0.05
MT-ND1P03886 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.71□□□□□ -0.05
MT-ND1P03886 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.71□□□□□ -0.05
MT-ND1P03886 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
MT-ND1P03886 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.71□□□□□ -0.05
MT-ND1P03886 AL136982.4-201ENST00000437689 1740 ntBASIC14.71□□□□□ -0.05
MT-ND1P03886 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
MT-ND1P03886 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MT-ND1P03886 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.71□□□□□ -0.06
MT-ND1P03886 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
MT-ND1P03886 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
MT-ND1P03886 AC010327.5-201ENST00000586923 3061 ntBASIC14.71□□□□□ -0.06
MT-ND1P03886 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.71□□□□□ -0.06
MT-ND1P03886 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MT-ND1P03886 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.71□□□□□ -0.06
MT-ND1P03886 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MT-ND1P03886 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.71□□□□□ -0.06
MT-ND1P03886 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
MT-ND1P03886 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MT-ND1P03886 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
MT-ND1P03886 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
MT-ND1P03886 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.71□□□□□ -0.06
MT-ND1P03886 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
MT-ND1P03886 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MT-ND1P03886 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.7□□□□□ -0.06
MT-ND1P03886 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 MTHFR-210ENST00000641407 2387 ntBASIC14.7□□□□□ -0.06
MT-ND1P03886 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
MT-ND1P03886 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.7□□□□□ -0.06
MT-ND1P03886 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.7□□□□□ -0.06
MT-ND1P03886 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.7□□□□□ -0.06
MT-ND1P03886 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.7□□□□□ -0.06
MT-ND1P03886 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 AL138918.1-201ENST00000568306 659 ntBASIC14.7□□□□□ -0.06
MT-ND1P03886 AC061975.2-201ENST00000581722 295 ntBASIC14.7□□□□□ -0.06
MT-ND1P03886 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.7□□□□□ -0.06
MT-ND1P03886 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MT-ND1P03886 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
MT-ND1P03886 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms