Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KRT18P43-201ENST00000469825 1281 ntBASIC13.86□□□□□ -0.19
CNOT4O95628 RN7SL399P-201ENST00000471648 279 ntBASIC13.86□□□□□ -0.19
CNOT4O95628 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.86□□□□□ -0.19
CNOT4O95628 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.86□□□□□ -0.19
CNOT4O95628 MIR4313-201ENST00000580760 101 ntBASIC13.86□□□□□ -0.19
CNOT4O95628 TMEM261P1-201ENST00000604899 340 ntBASIC13.86□□□□□ -0.19
CNOT4O95628 AC004790.1-201ENST00000612686 536 ntBASIC13.86□□□□□ -0.19
CNOT4O95628 AL158212.4-201ENST00000624062 1286 ntBASIC13.86□□□□□ -0.19
CNOT4O95628 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CNOT4O95628 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.86□□□□□ -0.19
CNOT4O95628 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.86□□□□□ -0.19
CNOT4O95628 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CNOT4O95628 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.85□□□□□ -0.19
CNOT4O95628 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CNOT4O95628 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
CNOT4O95628 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.85□□□□□ -0.19
CNOT4O95628 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.85□□□□□ -0.19
CNOT4O95628 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.85□□□□□ -0.19
CNOT4O95628 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CNOT4O95628 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 INE1-201ENST00000456273 945 ntBASIC13.85□□□□□ -0.19
CNOT4O95628 RN7SL752P-201ENST00000463779 287 ntBASIC13.85□□□□□ -0.19
CNOT4O95628 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.85□□□□□ -0.19
CNOT4O95628 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.85□□□□□ -0.19
CNOT4O95628 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.85□□□□□ -0.19
CNOT4O95628 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.85□□□□□ -0.19
CNOT4O95628 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.85□□□□□ -0.19
CNOT4O95628 AC000095.1-201ENST00000603208 874 ntBASIC13.85□□□□□ -0.19
CNOT4O95628 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CNOT4O95628 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.85□□□□□ -0.19
CNOT4O95628 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CNOT4O95628 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
CNOT4O95628 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.85□□□□□ -0.19
CNOT4O95628 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.85□□□□□ -0.19
CNOT4O95628 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.85□□□□□ -0.19
CNOT4O95628 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CNOT4O95628 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CNOT4O95628 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CNOT4O95628 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.84□□□□□ -0.19
CNOT4O95628 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.84□□□□□ -0.19
CNOT4O95628 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CNOT4O95628 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.84□□□□□ -0.19
CNOT4O95628 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 AL589987.1-201ENST00000453380 819 ntBASIC13.84□□□□□ -0.19
CNOT4O95628 AC011495.1-201ENST00000498085 584 ntBASIC13.84□□□□□ -0.19
CNOT4O95628 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.84□□□□□ -0.19
CNOT4O95628 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms