Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.37■□□□□ 0.21
RTN3O95197 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RTN3O95197 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.37■□□□□ 0.21
RTN3O95197 GK-202ENST00000378941 458 ntTSL 3 BASIC16.37■□□□□ 0.21
RTN3O95197 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.37■□□□□ 0.21
RTN3O95197 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RTN3O95197 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 AC026410.3-201ENST00000514280 936 ntBASIC16.37■□□□□ 0.21
RTN3O95197 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.37■□□□□ 0.21
RTN3O95197 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.37■□□□□ 0.21
RTN3O95197 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.37■□□□□ 0.21
RTN3O95197 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.37■□□□□ 0.21
RTN3O95197 AC010319.3-201ENST00000597028 470 ntBASIC16.37■□□□□ 0.21
RTN3O95197 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.37■□□□□ 0.21
RTN3O95197 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.37■□□□□ 0.21
RTN3O95197 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RTN3O95197 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.37■□□□□ 0.21
RTN3O95197 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN3O95197 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.36■□□□□ 0.21
RTN3O95197 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.36■□□□□ 0.21
RTN3O95197 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
RTN3O95197 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.36■□□□□ 0.21
RTN3O95197 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.36■□□□□ 0.21
RTN3O95197 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.36■□□□□ 0.21
RTN3O95197 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.36■□□□□ 0.21
RTN3O95197 AC106886.1-201ENST00000568660 600 ntBASIC16.36■□□□□ 0.21
RTN3O95197 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.36■□□□□ 0.21
RTN3O95197 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.36■□□□□ 0.21
RTN3O95197 AC093813.1-201ENST00000605066 256 ntBASIC16.36■□□□□ 0.21
RTN3O95197 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.36■□□□□ 0.21
RTN3O95197 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.36■□□□□ 0.21
RTN3O95197 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RTN3O95197 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RTN3O95197 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.36■□□□□ 0.21
RTN3O95197 DRD5P1-201ENST00000456605 1438 ntBASIC16.36■□□□□ 0.21
RTN3O95197 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.36■□□□□ 0.21
RTN3O95197 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTN3O95197 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RTN3O95197 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.35■□□□□ 0.21
RTN3O95197 AL137784.3-201ENST00000623858 2288 ntBASIC16.35■□□□□ 0.21
RTN3O95197 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 SNX18-202ENST00000343017 3140 ntBASIC16.35■□□□□ 0.21
RTN3O95197 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RTN3O95197 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RTN3O95197 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
RTN3O95197 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 U91328.1-201ENST00000437528 223 ntBASIC16.35■□□□□ 0.21
RTN3O95197 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.35■□□□□ 0.21
RTN3O95197 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.35■□□□□ 0.21
RTN3O95197 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.35■□□□□ 0.21
RTN3O95197 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.35■□□□□ 0.21
RTN3O95197 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RTN3O95197 AL162274.1-201ENST00000617191 1098 ntBASIC16.35■□□□□ 0.21
RTN3O95197 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms