Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 AC023794.5-201ENST00000564380 2157 ntBASIC13.54□□□□□ -0.24
UPK1BO75841 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK1BO75841 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 GPX1P2-201ENST00000429271 606 ntBASIC13.53□□□□□ -0.24
UPK1BO75841 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.53□□□□□ -0.24
UPK1BO75841 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.53□□□□□ -0.24
UPK1BO75841 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK1BO75841 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 AC090616.6-201ENST00000582640 721 ntBASIC13.53□□□□□ -0.24
UPK1BO75841 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
UPK1BO75841 AC021097.1-201ENST00000607902 574 ntBASIC13.53□□□□□ -0.24
UPK1BO75841 AC097493.4-201ENST00000641197 219 ntBASIC13.53□□□□□ -0.24
UPK1BO75841 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
UPK1BO75841 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK1BO75841 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
UPK1BO75841 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK1BO75841 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK1BO75841 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK1BO75841 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UPK1BO75841 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
UPK1BO75841 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.52□□□□□ -0.24
UPK1BO75841 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
UPK1BO75841 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.52□□□□□ -0.24
UPK1BO75841 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.52□□□□□ -0.24
UPK1BO75841 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
UPK1BO75841 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UPK1BO75841 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
UPK1BO75841 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.52□□□□□ -0.24
UPK1BO75841 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
UPK1BO75841 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UPK1BO75841 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
UPK1BO75841 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.52□□□□□ -0.24
UPK1BO75841 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
UPK1BO75841 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.52□□□□□ -0.25
UPK1BO75841 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.52□□□□□ -0.25
UPK1BO75841 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.52□□□□□ -0.25
UPK1BO75841 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.52□□□□□ -0.25
UPK1BO75841 AP002469.2-201ENST00000531724 424 ntBASIC13.52□□□□□ -0.25
UPK1BO75841 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.52□□□□□ -0.25
UPK1BO75841 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.52□□□□□ -0.25
UPK1BO75841 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 AC064862.7-201ENST00000604520 867 ntBASIC13.52□□□□□ -0.25
UPK1BO75841 AL139424.1-201ENST00000607572 797 ntBASIC13.52□□□□□ -0.25
UPK1BO75841 IGHV3-41-201ENST00000613121 348 ntBASIC13.52□□□□□ -0.25
UPK1BO75841 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.52□□□□□ -0.25
UPK1BO75841 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.52□□□□□ -0.25
UPK1BO75841 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UPK1BO75841 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
UPK1BO75841 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 FAM90A12P-201ENST00000519497 2375 ntBASIC13.52□□□□□ -0.25
UPK1BO75841 FAM90A24P-201ENST00000520792 2369 ntBASIC13.52□□□□□ -0.25
UPK1BO75841 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.52□□□□□ -0.25
UPK1BO75841 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK1BO75841 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms