Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PFDN1O60925 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.82□□□□□ -0.2
PFDN1O60925 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PFDN1O60925 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
PFDN1O60925 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC13.82□□□□□ -0.2
PFDN1O60925 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.82□□□□□ -0.2
PFDN1O60925 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PFDN1O60925 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PFDN1O60925 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PFDN1O60925 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.82□□□□□ -0.2
PFDN1O60925 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.82□□□□□ -0.2
PFDN1O60925 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.82□□□□□ -0.2
PFDN1O60925 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.82□□□□□ -0.2
PFDN1O60925 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PFDN1O60925 AC019129.2-201ENST00000609837 1235 ntBASIC13.82□□□□□ -0.2
PFDN1O60925 MIR6786-201ENST00000616843 113 ntBASIC13.82□□□□□ -0.2
PFDN1O60925 MIR6821-201ENST00000617625 74 ntBASIC13.82□□□□□ -0.2
PFDN1O60925 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.82□□□□□ -0.2
PFDN1O60925 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
PFDN1O60925 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PFDN1O60925 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.82□□□□□ -0.2
PFDN1O60925 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.82□□□□□ -0.2
PFDN1O60925 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PFDN1O60925 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PFDN1O60925 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PFDN1O60925 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PFDN1O60925 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PFDN1O60925 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.81□□□□□ -0.2
PFDN1O60925 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.81□□□□□ -0.2
PFDN1O60925 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PFDN1O60925 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.81□□□□□ -0.2
PFDN1O60925 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PFDN1O60925 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.81□□□□□ -0.2
PFDN1O60925 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 MIR663A-201ENST00000385250 93 ntBASIC13.81□□□□□ -0.2
PFDN1O60925 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 SLC29A4P1-201ENST00000398760 971 ntBASIC13.81□□□□□ -0.2
PFDN1O60925 KRASP1-201ENST00000407852 552 ntBASIC13.81□□□□□ -0.2
PFDN1O60925 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PFDN1O60925 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.81□□□□□ -0.2
PFDN1O60925 CA15P1-201ENST00000481698 905 ntBASIC13.81□□□□□ -0.2
PFDN1O60925 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.81□□□□□ -0.2
PFDN1O60925 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.81□□□□□ -0.2
PFDN1O60925 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.81□□□□□ -0.2
PFDN1O60925 MIR4758-201ENST00000577688 71 ntBASIC13.81□□□□□ -0.2
PFDN1O60925 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.81□□□□□ -0.2
PFDN1O60925 AC087623.3-201ENST00000607047 1098 ntBASIC13.81□□□□□ -0.2
PFDN1O60925 AP000692.2-201ENST00000608391 879 ntBASIC13.81□□□□□ -0.2
PFDN1O60925 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PFDN1O60925 MYC-209ENST00000641252 345 ntBASIC13.81□□□□□ -0.2
PFDN1O60925 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PFDN1O60925 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC13.81□□□□□ -0.2
PFDN1O60925 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.81□□□□□ -0.2
PFDN1O60925 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.81□□□□□ -0.2
PFDN1O60925 PER1-211ENST00000581082 4521 ntTSL 5 BASIC13.81□□□□□ -0.2
PFDN1O60925 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PFDN1O60925 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PFDN1O60925 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PFDN1O60925 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PFDN1O60925 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms