Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CLDN5O00501 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN5O00501 RPL5P21-201ENST00000404620 815 ntBASIC16.3■□□□□ 0.2
CLDN5O00501 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLDN5O00501 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN5O00501 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN5O00501 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.3■□□□□ 0.2
CLDN5O00501 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLDN5O00501 AP001889.1-201ENST00000525414 633 ntBASIC16.3■□□□□ 0.2
CLDN5O00501 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN5O00501 PTP4A1P2-201ENST00000546033 454 ntBASIC16.3■□□□□ 0.2
CLDN5O00501 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLDN5O00501 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN5O00501 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN5O00501 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN5O00501 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN5O00501 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDN5O00501 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 BX539320.1-201ENST00000623759 877 ntBASIC16.3■□□□□ 0.2
CLDN5O00501 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLDN5O00501 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 PPT1-215ENST00000641471 2368 ntBASIC16.3■□□□□ 0.2
CLDN5O00501 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN5O00501 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN5O00501 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN5O00501 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN5O00501 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN5O00501 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
CLDN5O00501 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN5O00501 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLDN5O00501 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN5O00501 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN5O00501 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN5O00501 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN5O00501 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN5O00501 AC134312.5-201ENST00000568031 1313 ntBASIC16.29■□□□□ 0.2
CLDN5O00501 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CLDN5O00501 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLDN5O00501 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CLDN5O00501 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CLDN5O00501 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN5O00501 BAATP1-201ENST00000412284 1225 ntBASIC16.29■□□□□ 0.2
CLDN5O00501 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLDN5O00501 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN5O00501 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN5O00501 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN5O00501 AC106760.1-201ENST00000508690 800 ntBASIC16.29■□□□□ 0.2
CLDN5O00501 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN5O00501 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN5O00501 AC009486.1-201ENST00000569860 813 ntBASIC16.29■□□□□ 0.2
CLDN5O00501 AC233724.13-201ENST00000598383 410 ntBASIC16.29■□□□□ 0.2
CLDN5O00501 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN5O00501 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.29■□□□□ 0.2
CLDN5O00501 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN5O00501 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN5O00501 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 AC007787.1-201ENST00000588095 1583 ntBASIC16.29■□□□□ 0.2
CLDN5O00501 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN5O00501 MST1L-201ENST00000442552 2185 ntBASIC16.28■□□□□ 0.2
CLDN5O00501 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN5O00501 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN5O00501 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN5O00501 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN5O00501 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN5O00501 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN5O00501 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN5O00501 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN5O00501 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN5O00501 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN5O00501 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLDN5O00501 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN5O00501 AC073347.1-201ENST00000421633 2643 ntBASIC16.28■□□□□ 0.2
CLDN5O00501 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms