Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.6■□□□□ 0.25
FOXN3O00409 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
FOXN3O00409 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FOXN3O00409 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXN3O00409 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.59■□□□□ 0.25
FOXN3O00409 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
FOXN3O00409 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.59■□□□□ 0.25
FOXN3O00409 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.59■□□□□ 0.25
FOXN3O00409 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.59■□□□□ 0.25
FOXN3O00409 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 AL391069.4-201ENST00000609583 481 ntBASIC16.59■□□□□ 0.25
FOXN3O00409 AL645728.2-202ENST00000641679 227 ntBASIC16.59■□□□□ 0.25
FOXN3O00409 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.59■□□□□ 0.25
FOXN3O00409 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
FOXN3O00409 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXN3O00409 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXN3O00409 ACE3P-201ENST00000423435 1973 ntBASIC16.58■□□□□ 0.25
FOXN3O00409 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXN3O00409 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FOXN3O00409 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXN3O00409 AC013726.1-201ENST00000563747 2285 ntBASIC16.58■□□□□ 0.25
FOXN3O00409 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXN3O00409 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXN3O00409 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FOXN3O00409 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXN3O00409 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.58■□□□□ 0.25
FOXN3O00409 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXN3O00409 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXN3O00409 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
FOXN3O00409 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
FOXN3O00409 AC104457.1-201ENST00000401024 814 ntBASIC16.58■□□□□ 0.24
FOXN3O00409 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.58■□□□□ 0.24
FOXN3O00409 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.58■□□□□ 0.24
FOXN3O00409 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXN3O00409 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXN3O00409 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXN3O00409 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.58■□□□□ 0.24
FOXN3O00409 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.58■□□□□ 0.24
FOXN3O00409 AC005498.2-205ENST00000593218 784 ntBASIC16.58■□□□□ 0.24
FOXN3O00409 AC004790.1-201ENST00000612686 536 ntBASIC16.58■□□□□ 0.24
FOXN3O00409 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXN3O00409 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXN3O00409 AL158212.4-201ENST00000624062 1286 ntBASIC16.58■□□□□ 0.24
FOXN3O00409 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
FOXN3O00409 CLK3P2-201ENST00000427566 1453 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms