Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.66□□□□□ -0.06
CLIC1O00299 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 REXO1L2P-201ENST00000425429 2069 ntBASIC14.66□□□□□ -0.06
CLIC1O00299 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.66□□□□□ -0.06
CLIC1O00299 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.66□□□□□ -0.06
CLIC1O00299 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.66□□□□□ -0.06
CLIC1O00299 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CLIC1O00299 AL035456.1-201ENST00000456064 1369 ntBASIC14.66□□□□□ -0.06
CLIC1O00299 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CLIC1O00299 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
CLIC1O00299 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.66□□□□□ -0.06
CLIC1O00299 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.66□□□□□ -0.06
CLIC1O00299 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.66□□□□□ -0.06
CLIC1O00299 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.66□□□□□ -0.06
CLIC1O00299 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.66□□□□□ -0.06
CLIC1O00299 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.66□□□□□ -0.06
CLIC1O00299 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.66□□□□□ -0.06
CLIC1O00299 AL513210.1-201ENST00000629608 234 ntBASIC14.66□□□□□ -0.06
CLIC1O00299 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CLIC1O00299 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CLIC1O00299 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.66□□□□□ -0.06
CLIC1O00299 AC005912.2-201ENST00000619492 2400 ntBASIC14.66□□□□□ -0.06
CLIC1O00299 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.66□□□□□ -0.06
CLIC1O00299 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CLIC1O00299 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLIC1O00299 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CLIC1O00299 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
CLIC1O00299 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CLIC1O00299 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLIC1O00299 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLIC1O00299 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CLIC1O00299 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.65□□□□□ -0.06
CLIC1O00299 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 AC004461.1-201ENST00000412461 403 ntBASIC14.65□□□□□ -0.06
CLIC1O00299 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 AL627223.1-201ENST00000416693 442 ntBASIC14.65□□□□□ -0.06
CLIC1O00299 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 GHSR-202ENST00000427970 912 ntBASIC14.65□□□□□ -0.06
CLIC1O00299 RBPMS2P1-201ENST00000437762 623 ntBASIC14.65□□□□□ -0.06
CLIC1O00299 MTND6P24-201ENST00000440466 518 ntBASIC14.65□□□□□ -0.06
CLIC1O00299 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
CLIC1O00299 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.65□□□□□ -0.06
CLIC1O00299 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.65□□□□□ -0.06
CLIC1O00299 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CLIC1O00299 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.65□□□□□ -0.06
CLIC1O00299 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.65□□□□□ -0.06
CLIC1O00299 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.65□□□□□ -0.06
CLIC1O00299 AC007967.4-201ENST00000614700 386 ntBASIC14.65□□□□□ -0.06
CLIC1O00299 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.65□□□□□ -0.06
CLIC1O00299 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms