Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.42■□□□□ 0.38
DDX39AO00148 BTNL10-201ENST00000595971 695 ntBASIC17.42■□□□□ 0.38
DDX39AO00148 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX39AO00148 AC093813.1-201ENST00000605066 256 ntBASIC17.42■□□□□ 0.38
DDX39AO00148 AL512343.1-201ENST00000605837 169 ntBASIC17.42■□□□□ 0.38
DDX39AO00148 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DDX39AO00148 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 AL138799.1-201ENST00000448213 1675 ntBASIC17.42■□□□□ 0.38
DDX39AO00148 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.42■□□□□ 0.38
DDX39AO00148 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
DDX39AO00148 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
DDX39AO00148 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
DDX39AO00148 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
DDX39AO00148 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
DDX39AO00148 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
DDX39AO00148 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.41■□□□□ 0.38
DDX39AO00148 AC234783.1-201ENST00000441761 496 ntBASIC17.41■□□□□ 0.38
DDX39AO00148 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.41■□□□□ 0.38
DDX39AO00148 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.41■□□□□ 0.38
DDX39AO00148 AC233724.13-201ENST00000598383 410 ntBASIC17.41■□□□□ 0.38
DDX39AO00148 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.41■□□□□ 0.38
DDX39AO00148 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX39AO00148 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.41■□□□□ 0.38
DDX39AO00148 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX39AO00148 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX39AO00148 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX39AO00148 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX39AO00148 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 NORAD-201ENST00000565493 5339 ntBASIC17.4■□□□□ 0.38
DDX39AO00148 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX39AO00148 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.4■□□□□ 0.38
DDX39AO00148 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
DDX39AO00148 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX39AO00148 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.4■□□□□ 0.38
DDX39AO00148 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
DDX39AO00148 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX39AO00148 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.4■□□□□ 0.38
DDX39AO00148 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.4■□□□□ 0.38
DDX39AO00148 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.4■□□□□ 0.38
DDX39AO00148 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.4■□□□□ 0.38
DDX39AO00148 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.4■□□□□ 0.38
DDX39AO00148 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.4■□□□□ 0.38
DDX39AO00148 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.4■□□□□ 0.38
DDX39AO00148 AP001063.1-201ENST00000568332 529 ntBASIC17.4■□□□□ 0.38
DDX39AO00148 AC017083.2-201ENST00000608069 979 ntBASIC17.4■□□□□ 0.38
DDX39AO00148 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX39AO00148 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX39AO00148 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX39AO00148 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
DDX39AO00148 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 AC134312.5-201ENST00000568031 1313 ntBASIC17.4■□□□□ 0.38
DDX39AO00148 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DDX39AO00148 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX39AO00148 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.4■□□□□ 0.38
DDX39AO00148 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DDX39AO00148 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DDX39AO00148 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms