Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 AC136632.2-201ENST00000512891 861 ntBASIC11.41□□□□□ -0.58
SMKR1H3BMG3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 AC021087.4-201ENST00000563761 564 ntBASIC11.41□□□□□ -0.58
SMKR1H3BMG3 OR7E47P-204ENST00000575924 449 ntBASIC11.41□□□□□ -0.58
SMKR1H3BMG3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.41□□□□□ -0.58
SMKR1H3BMG3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 PMS2P7-201ENST00000506558 1336 ntBASIC11.4□□□□□ -0.58
SMKR1H3BMG3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 CICP17-201ENST00000418553 2377 ntBASIC11.4□□□□□ -0.58
SMKR1H3BMG3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 AC073621.1-201ENST00000392730 636 ntBASIC11.4□□□□□ -0.58
SMKR1H3BMG3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 TMPOP1-202ENST00000424642 1267 ntBASIC11.4□□□□□ -0.58
SMKR1H3BMG3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 FAM185BP-201ENST00000443595 716 ntBASIC11.4□□□□□ -0.58
SMKR1H3BMG3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 SCARNA2-201ENST00000458748 420 ntBASIC11.4□□□□□ -0.58
SMKR1H3BMG3 IGHV3-65-201ENST00000523210 341 ntBASIC11.4□□□□□ -0.58
SMKR1H3BMG3 AC243562.2-201ENST00000561247 970 ntBASIC11.4□□□□□ -0.58
SMKR1H3BMG3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 AC107918.4-202ENST00000641623 219 ntBASIC11.4□□□□□ -0.58
SMKR1H3BMG3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.4□□□□□ -0.58
SMKR1H3BMG3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMKR1H3BMG3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMKR1H3BMG3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SMKR1H3BMG3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMKR1H3BMG3 CICP11-201ENST00000434745 2827 ntBASIC11.4□□□□□ -0.59
SMKR1H3BMG3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SMKR1H3BMG3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms