Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 CICP11-201ENST00000434745 2827 ntBASIC17.29■□□□□ 0.36
LOC285556D6RIA3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
LOC285556D6RIA3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LOC285556D6RIA3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.29■□□□□ 0.36
LOC285556D6RIA3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.29■□□□□ 0.36
LOC285556D6RIA3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LOC285556D6RIA3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LOC285556D6RIA3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
LOC285556D6RIA3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.29■□□□□ 0.36
LOC285556D6RIA3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
LOC285556D6RIA3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LOC285556D6RIA3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AL645933.1-201ENST00000440087 609 ntBASIC17.28■□□□□ 0.36
LOC285556D6RIA3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AC019193.1-201ENST00000506678 823 ntBASIC17.28■□□□□ 0.36
LOC285556D6RIA3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AC012508.2-201ENST00000567613 1472 ntBASIC17.28■□□□□ 0.36
LOC285556D6RIA3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AL359258.3-201ENST00000622910 2331 ntBASIC17.28■□□□□ 0.36
LOC285556D6RIA3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 NPM1P43-201ENST00000558669 786 ntBASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LOC285556D6RIA3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 CICP13-201ENST00000422015 2789 ntBASIC17.27■□□□□ 0.36
LOC285556D6RIA3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.27■□□□□ 0.36
LOC285556D6RIA3 AC112693.3-201ENST00000624819 1983 ntBASIC17.27■□□□□ 0.36
LOC285556D6RIA3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 NOC2LP1-201ENST00000450578 752 ntBASIC17.27■□□□□ 0.35
LOC285556D6RIA3 RN7SL67P-201ENST00000492147 296 ntBASIC17.27■□□□□ 0.35
LOC285556D6RIA3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 AC006453.1-201ENST00000636037 1257 ntBASIC17.27■□□□□ 0.35
LOC285556D6RIA3 NAP1L6-202ENST00000641404 1222 ntBASIC17.27■□□□□ 0.35
LOC285556D6RIA3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LOC285556D6RIA3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LOC285556D6RIA3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LOC285556D6RIA3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LOC285556D6RIA3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LOC285556D6RIA3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LOC285556D6RIA3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.26■□□□□ 0.35
LOC285556D6RIA3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms