Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 AL451007.2-201ENST00000632004 563 ntBASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 Z98259.2-201ENST00000641583 609 ntBASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AC078925.2-201ENST00000624013 1973 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 UROS-201ENST00000368774 744 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AQP7P5-201ENST00000428759 1049 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 BRI3P1-201ENST00000440440 378 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AQP7P4-201ENST00000447083 1042 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AQP7P2-201ENST00000453967 1041 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 MRPL22P1-201ENST00000505398 616 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AP000911.2-201ENST00000534330 502 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AC007326.1-201ENST00000604539 458 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AQP7P3-201ENST00000624547 1041 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 FAM90A21P-201ENST00000510875 1396 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 FAM90A15P-201ENST00000514465 1395 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 FAM90A6P-201ENST00000515148 1394 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 FAM90A16P-201ENST00000526662 1395 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 FAM90A9P-201ENST00000527940 1395 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 FAM90A5P-201ENST00000528738 1395 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 FAM90A14P-201ENST00000530386 1395 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 FAM90A13P-201ENST00000534703 1395 ntBASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM88BA6NKF7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 AC009093.2-202ENST00000620513 2079 ntBASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 ORAOV1P1-201ENST00000503108 395 ntBASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 AC008825.2-201ENST00000603374 718 ntBASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM88BA6NKF7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms