Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 AC023908.3-201ENST00000564211 3047 ntBASIC15.8■□□□□ 0.12
CAPN8A6NHC0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 RPS2P32-201ENST00000439199 892 ntBASIC15.8■□□□□ 0.12
CAPN8A6NHC0 SPTLC1P1-201ENST00000447199 261 ntBASIC15.8■□□□□ 0.12
CAPN8A6NHC0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 TIMM17BP1-201ENST00000545713 516 ntBASIC15.8■□□□□ 0.12
CAPN8A6NHC0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN8A6NHC0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 AC098614.1-201ENST00000368528 745 ntBASIC15.79■□□□□ 0.12
CAPN8A6NHC0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 AL589987.1-201ENST00000453380 819 ntBASIC15.79■□□□□ 0.12
CAPN8A6NHC0 DOC2GP-202ENST00000514950 1163 ntBASIC15.79■□□□□ 0.12
CAPN8A6NHC0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN8A6NHC0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.78■□□□□ 0.12
CAPN8A6NHC0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.78■□□□□ 0.12
CAPN8A6NHC0 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms