Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 AL844908.2-201ENST00000609461 460 ntBASIC14.3□□□□□ -0.12
CDHR4A6H8M9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.3□□□□□ -0.12
CDHR4A6H8M9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CDHR4A6H8M9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 GHSR-202ENST00000427970 912 ntBASIC14.29□□□□□ -0.12
CDHR4A6H8M9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 KRT18P43-201ENST00000469825 1281 ntBASIC14.29□□□□□ -0.12
CDHR4A6H8M9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 AC097493.3-201ENST00000509725 367 ntBASIC14.29□□□□□ -0.12
CDHR4A6H8M9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 CICP24-201ENST00000605464 2705 ntBASIC14.29□□□□□ -0.12
CDHR4A6H8M9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 ZBED1P1-201ENST00000502364 1930 ntBASIC14.29□□□□□ -0.12
CDHR4A6H8M9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDHR4A6H8M9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDHR4A6H8M9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms