Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 TFAMP1-201ENST00000412727 736 ntBASIC15□□□□□ -0.01
AP4B1Q9Y6B7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 AC254562.1-201ENST00000417586 456 ntBASIC15□□□□□ -0.01
AP4B1Q9Y6B7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 AC026120.1-201ENST00000611536 926 ntBASIC15□□□□□ -0.01
AP4B1Q9Y6B7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4B1Q9Y6B7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 ADH5P3-201ENST00000433842 1137 ntBASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 SPDYE11-202ENST00000450699 704 ntBASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 AP000344.2-201ENST00000512987 629 ntBASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 SPDYE9P-201ENST00000570642 692 ntBASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 SPDYE10P-202ENST00000612005 668 ntBASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 SPDYE8P-202ENST00000612377 668 ntBASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4B1Q9Y6B7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP4B1Q9Y6B7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms