Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 PGAM5P1-201ENST00000518923 814 ntBASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 AC243562.2-201ENST00000561247 970 ntBASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 AC140113.2-201ENST00000604370 208 ntBASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 AC073439.1-201ENST00000624121 1774 ntBASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 AC113367.3-201ENST00000508316 1912 ntBASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 LINC01230-201ENST00000625222 3017 ntBASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 AC092474.2-201ENST00000424288 719 ntBASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 GPX1P2-201ENST00000429271 606 ntBASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGB1Q9Y5G3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGB1Q9Y5G3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms