Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS9D1Q9Y2B5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS9D1Q9Y2B5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS9D1Q9Y2B5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS9D1Q9Y2B5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS9D1Q9Y2B5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 TOMM22P5-201ENST00000416399 439 ntBASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 KRT18P43-201ENST00000469825 1281 ntBASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 AC093028.1-201ENST00000622998 982 ntBASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.53■□□□□ 0.08
VPS9D1Q9Y2B5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AC138969.3-201ENST00000546612 1459 ntBASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AC138932.2-201ENST00000548268 1459 ntBASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AC126755.4-201ENST00000549796 1459 ntBASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 KRT18P28-201ENST00000453838 1332 ntBASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AC055748.1-201ENST00000489836 959 ntBASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 AL157762.1-201ENST00000619612 415 ntBASIC15.52■□□□□ 0.08
VPS9D1Q9Y2B5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
VPS9D1Q9Y2B5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms