Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AL365209.1-201ENST00000624418 6473 ntBASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 MIR346-201ENST00000362234 95 ntBASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AC211486.1-202ENST00000416371 468 ntBASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AC211476.1-201ENST00000503899 468 ntBASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 YBX1P5-201ENST00000509441 847 ntBASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 LINC01225-203ENST00000563550 1244 ntBASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AC055717.3-201ENST00000622967 595 ntBASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AC148477.4-201ENST00000613430 1793 ntBASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 AC008677.1-201ENST00000519230 1561 ntBASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 HLA-H-201ENST00000383620 1096 ntBASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 AC022145.2-201ENST00000598203 171 ntBASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 AC004835.2-201ENST00000603762 682 ntBASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
HHLA3Q9XRX5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms