Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 AC104073.2-201ENST00000453737 312 ntBASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 IGHV3-37-201ENST00000518544 340 ntBASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 MIR4649-201ENST00000582839 64 ntBASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 AC103810.10-201ENST00000606504 343 ntBASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 NAP1L6-202ENST00000641404 1222 ntBASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.57■□□□□ 0.56
ZC3H4Q9UPT8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 AL132994.2-201ENST00000603120 687 ntBASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 AL162426.1-201ENST00000624141 743 ntBASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 AC074138.1-201ENST00000611182 1303 ntBASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ZC3H4Q9UPT8 PCDHA1-201ENST00000378133 2726 ntBASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms