Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC3Q9UN70 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 AL353779.1-201ENST00000434793 351 ntBASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 VDAC1P7-201ENST00000462417 847 ntBASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 AC004233.3-201ENST00000607794 1269 ntBASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 AC093525.8-201ENST00000624099 1342 ntBASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 AC007541.1-201ENST00000570282 1469 ntBASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGC3Q9UN70 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 AC236430.1-201ENST00000402231 743 ntBASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 AC087499.6-201ENST00000411576 835 ntBASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 TNRC18P2-201ENST00000417666 2714 ntBASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 AL442647.2-201ENST00000429864 857 ntBASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 AC104596.2-201ENST00000512793 793 ntBASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 API5-211ENST00000534695 560 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms