Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 SPDYE17-201ENST00000412399 783 ntBASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 AL450472.2-201ENST00000603663 1156 ntBASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 KRT8P12-202ENST00000472924 1397 ntBASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 CDC14C-201ENST00000428251 1719 ntBASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms