Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 AC011498.7-201ENST00000624986 2027 ntBASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 AL713866.1-201ENST00000563320 3125 ntBASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 AC136604.1-202ENST00000425471 771 ntBASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 AL160286.2-201ENST00000567150 934 ntBASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 MTDHP2-201ENST00000601468 714 ntBASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 AC099791.2-201ENST00000605725 427 ntBASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 AC016575.1-201ENST00000607026 382 ntBASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 AL121832.2-201ENST00000610979 668 ntBASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42SE1Q9NRR8 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
CDC42SE1Q9NRR8 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
CDC42SE1Q9NRR8 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
CDC42SE1Q9NRR8 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.16
CDC42SE1Q9NRR8 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms