Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.32□□□□□ -0.28
GCM1Q9NP62 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GCM1Q9NP62 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.32□□□□□ -0.28
GCM1Q9NP62 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 ST20-AS1-201ENST00000560255 4223 ntBASIC13.31□□□□□ -0.28
GCM1Q9NP62 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 TOMM22P5-201ENST00000416399 439 ntBASIC13.31□□□□□ -0.28
GCM1Q9NP62 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.31□□□□□ -0.28
GCM1Q9NP62 KRT18P64-201ENST00000434946 1219 ntBASIC13.31□□□□□ -0.28
GCM1Q9NP62 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 AC004790.1-201ENST00000612686 536 ntBASIC13.31□□□□□ -0.28
GCM1Q9NP62 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
GCM1Q9NP62 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GCM1Q9NP62 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 PIN1P1-201ENST00000412108 996 ntBASIC13.3□□□□□ -0.28
GCM1Q9NP62 MEP1AP4-201ENST00000423244 1087 ntBASIC13.3□□□□□ -0.28
GCM1Q9NP62 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms