Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 MIR346-201ENST00000362234 95 ntBASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AC104457.1-201ENST00000401024 814 ntBASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AC064836.3-201ENST00000607928 673 ntBASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 AC007787.1-201ENST00000588095 1583 ntBASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
GABARAPL3Q9BY60 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 AL355306.1-201ENST00000415580 579 ntBASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 AP000842.3-202ENST00000569238 1080 ntBASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 AL645728.2-202ENST00000641679 227 ntBASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GABARAPL3Q9BY60 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms