Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 AL355994.2-201ENST00000447882 704 ntBASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 KRT18P43-201ENST00000469825 1281 ntBASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 AP001889.1-201ENST00000525414 633 ntBASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.77■□□□□ 0.6
RPAP1Q9BWH6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.77■□□□□ 0.59
RPAP1Q9BWH6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.77■□□□□ 0.59
RPAP1Q9BWH6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPAP1Q9BWH6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPAP1Q9BWH6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.77■□□□□ 0.59
RPAP1Q9BWH6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPAP1Q9BWH6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RPAP1Q9BWH6 AC093525.8-201ENST00000624099 1342 ntBASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 RPL7P3-201ENST00000441388 714 ntBASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 RNA5SP412-201ENST00000516234 123 ntBASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 AP000812.2-201ENST00000538934 718 ntBASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 AL583810.1-201ENST00000553344 1045 ntBASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 AC015910.1-201ENST00000579400 975 ntBASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPAP1Q9BWH6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPAP1Q9BWH6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 KRT8P44-201ENST00000441609 1350 ntBASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms