Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 AC015911.4-201ENST00000588022 1070 ntBASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 AL138828.2-201ENST00000615812 383 ntBASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 MIR6069-201ENST00000620069 79 ntBASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
YIPF4Q9BSR8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 AC138761.1-201ENST00000584393 385 ntBASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 AJ011932.1-201ENST00000621707 465 ntBASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 AL033527.5-202ENST00000641632 1098 ntBASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
YIPF4Q9BSR8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
YIPF4Q9BSR8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
YIPF4Q9BSR8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.66□□□□□ -0.06
YIPF4Q9BSR8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
YIPF4Q9BSR8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
YIPF4Q9BSR8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YIPF4Q9BSR8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.66□□□□□ -0.06
YIPF4Q9BSR8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YIPF4Q9BSR8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
YIPF4Q9BSR8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms