Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 AC079336.7-201ENST00000623428 1078 ntBASIC15.67■□□□□ 0.1
NOTCH4Q99466 AC128714.1-201ENST00000637035 887 ntBASIC15.67■□□□□ 0.1
NOTCH4Q99466 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 AL513523.2-202ENST00000427283 2040 ntBASIC15.66■□□□□ 0.1
NOTCH4Q99466 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 AP000346.4-201ENST00000614827 381 ntBASIC15.66■□□□□ 0.1
NOTCH4Q99466 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.66■□□□□ 0.1
NOTCH4Q99466 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NOTCH4Q99466 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.65■□□□□ 0.1
NOTCH4Q99466 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 AC125604.1-201ENST00000496255 707 ntBASIC15.65■□□□□ 0.1
NOTCH4Q99466 AC116345.2-201ENST00000512837 523 ntBASIC15.65■□□□□ 0.1
NOTCH4Q99466 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.65■□□□□ 0.1
NOTCH4Q99466 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.65■□□□□ 0.1
NOTCH4Q99466 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NOTCH4Q99466 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NOTCH4Q99466 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH4Q99466 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH4Q99466 AC244394.1-201ENST00000435000 1665 ntBASIC15.64■□□□□ 0.09
NOTCH4Q99466 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH4Q99466 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.64■□□□□ 0.09
NOTCH4Q99466 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.64■□□□□ 0.09
NOTCH4Q99466 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH4Q99466 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH4Q99466 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NOTCH4Q99466 AC020910.5-201ENST00000623668 1865 ntBASIC15.64■□□□□ 0.09
NOTCH4Q99466 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NOTCH4Q99466 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NOTCH4Q99466 VDAC1P1-201ENST00000439229 848 ntBASIC15.64■□□□□ 0.09
NOTCH4Q99466 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.64■□□□□ 0.09
NOTCH4Q99466 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.64■□□□□ 0.09
NOTCH4Q99466 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms