Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 AC098850.1-201ENST00000419919 790 ntBASIC16.06■□□□□ 0.16
HAPLN3Q96S86 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 AC026410.3-201ENST00000514280 936 ntBASIC16.06■□□□□ 0.16
HAPLN3Q96S86 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 AL049840.4-201ENST00000602422 811 ntBASIC16.06■□□□□ 0.16
HAPLN3Q96S86 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 AC007431.3-201ENST00000623221 587 ntBASIC16.06■□□□□ 0.16
HAPLN3Q96S86 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.06■□□□□ 0.16
HAPLN3Q96S86 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HAPLN3Q96S86 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 C18orf15-201ENST00000623680 2534 ntBASIC16.05■□□□□ 0.16
HAPLN3Q96S86 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HAPLN3Q96S86 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 KRT8P44-201ENST00000441609 1350 ntBASIC16.04■□□□□ 0.16
HAPLN3Q96S86 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 PPT1-215ENST00000641471 2368 ntBASIC16.04■□□□□ 0.16
HAPLN3Q96S86 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 COX20P2-201ENST00000452636 358 ntBASIC16.04■□□□□ 0.16
HAPLN3Q96S86 ELK1P1-201ENST00000485699 580 ntBASIC16.04■□□□□ 0.16
HAPLN3Q96S86 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.04■□□□□ 0.16
HAPLN3Q96S86 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms