Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AL360270.3-201ENST00000609118 1348 ntBASIC18.69■□□□□ 0.58
CRAMP1Q96RY5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRAMP1Q96RY5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRAMP1Q96RY5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.69■□□□□ 0.58
CRAMP1Q96RY5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.69■□□□□ 0.58
CRAMP1Q96RY5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRAMP1Q96RY5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 AC007274.2-201ENST00000421675 662 ntBASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 PUDPP3-201ENST00000445368 636 ntBASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 TNRC18P3-201ENST00000441896 2691 ntBASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.68■□□□□ 0.58
CRAMP1Q96RY5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 EEF1DP6-201ENST00000449232 372 ntBASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 PRKXP1-201ENST00000561423 1122 ntBASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.67■□□□□ 0.58
CRAMP1Q96RY5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AC253536.4-201ENST00000440539 267 ntBASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AC125604.1-201ENST00000496255 707 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms