Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 AC021097.1-201ENST00000607902 574 ntBASIC11.84□□□□□ -0.51
AP1S3Q96PC3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 AP000550.4-202ENST00000639755 178 ntBASIC11.84□□□□□ -0.51
AP1S3Q96PC3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 CICP24-201ENST00000605464 2705 ntBASIC11.84□□□□□ -0.51
AP1S3Q96PC3 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 SSR4P1-203ENST00000599569 2260 ntBASIC11.84□□□□□ -0.51
AP1S3Q96PC3 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
AP1S3Q96PC3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 AC020658.6-201ENST00000623564 1870 ntBASIC11.83□□□□□ -0.52
AP1S3Q96PC3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 AC012569.1-201ENST00000591191 1524 ntBASIC11.83□□□□□ -0.52
AP1S3Q96PC3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 LAGE3P1-201ENST00000425356 484 ntBASIC11.83□□□□□ -0.52
AP1S3Q96PC3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.83□□□□□ -0.52
AP1S3Q96PC3 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 AC092119.3-201ENST00000612618 583 ntBASIC11.83□□□□□ -0.52
AP1S3Q96PC3 NPAP1P7-201ENST00000613027 823 ntBASIC11.83□□□□□ -0.52
AP1S3Q96PC3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
AP1S3Q96PC3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms