Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 GHSR-202ENST00000427970 912 ntBASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 AC025181.2-201ENST00000606994 802 ntBASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 AL390754.1-201ENST00000619088 582 ntBASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 BTBD7P1-201ENST00000447253 1453 ntBASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RHBDF1Q96CC6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 ZBED1P1-201ENST00000502364 1930 ntBASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 TIMM17BP1-201ENST00000545713 516 ntBASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 AC093512.1-201ENST00000617969 520 ntBASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 AL645728.2-202ENST00000641679 227 ntBASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 LINC00528-201ENST00000600723 2160 ntBASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RHBDF1Q96CC6 WASH3P-207ENST00000560956 1394 ntBASIC15.11■□□□□ 0.01
RHBDF1Q96CC6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RHBDF1Q96CC6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RHBDF1Q96CC6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RHBDF1Q96CC6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RHBDF1Q96CC6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RHBDF1Q96CC6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.11■□□□□ 0.01
RHBDF1Q96CC6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms