Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.5■□□□□ 0.23
DDX1Q92499 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
DDX1Q92499 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.5■□□□□ 0.23
DDX1Q92499 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.49■□□□□ 0.23
DDX1Q92499 CLK3P2-201ENST00000427566 1453 ntBASIC16.49■□□□□ 0.23
DDX1Q92499 AC007541.1-201ENST00000570282 1469 ntBASIC16.49■□□□□ 0.23
DDX1Q92499 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.49■□□□□ 0.23
DDX1Q92499 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.49■□□□□ 0.23
DDX1Q92499 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
DDX1Q92499 AC087499.6-201ENST00000411576 835 ntBASIC16.49■□□□□ 0.23
DDX1Q92499 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 AC135586.1-201ENST00000539323 574 ntBASIC16.49■□□□□ 0.23
DDX1Q92499 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.49■□□□□ 0.23
DDX1Q92499 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.49■□□□□ 0.23
DDX1Q92499 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
DDX1Q92499 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.49■□□□□ 0.23
DDX1Q92499 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
DDX1Q92499 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
DDX1Q92499 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.49■□□□□ 0.23
DDX1Q92499 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.49■□□□□ 0.23
DDX1Q92499 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 AL391825.1-201ENST00000457671 1364 ntBASIC16.49■□□□□ 0.23
DDX1Q92499 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 WASH3P-207ENST00000560956 1394 ntBASIC16.49■□□□□ 0.23
DDX1Q92499 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DDX1Q92499 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
DDX1Q92499 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
DDX1Q92499 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.49■□□□□ 0.23
DDX1Q92499 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
DDX1Q92499 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.48■□□□□ 0.23
DDX1Q92499 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
DDX1Q92499 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
DDX1Q92499 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.48■□□□□ 0.23
DDX1Q92499 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
DDX1Q92499 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
DDX1Q92499 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.48■□□□□ 0.23
DDX1Q92499 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 GAPDHP40-201ENST00000505218 1006 ntBASIC16.48■□□□□ 0.23
DDX1Q92499 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
DDX1Q92499 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
DDX1Q92499 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.48■□□□□ 0.23
DDX1Q92499 MIR4525-201ENST00000580000 75 ntBASIC16.48■□□□□ 0.23
DDX1Q92499 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
DDX1Q92499 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DDX1Q92499 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
DDX1Q92499 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms