Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 AC069335.1-201ENST00000489972 472 ntBASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 RNA5SP410-201ENST00000516285 106 ntBASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 AL513210.1-201ENST00000629608 234 ntBASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTN4IP1Q8WWV3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
RTN4IP1Q8WWV3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
RTN4IP1Q8WWV3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RTN4IP1Q8WWV3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
RTN4IP1Q8WWV3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.31
RTN4IP1Q8WWV3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
RTN4IP1Q8WWV3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 FAM220BP-201ENST00000377689 816 ntBASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 HLA-H-201ENST00000383620 1096 ntBASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AL645939.2-201ENST00000427340 991 ntBASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AP000344.2-201ENST00000512987 629 ntBASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 MIR4313-201ENST00000580760 101 ntBASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AC061975.2-201ENST00000581722 295 ntBASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AC055717.3-201ENST00000622967 595 ntBASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AC084121.4-201ENST00000641598 221 ntBASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AF228730.8-201ENST00000642140 221 ntBASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms