Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PCDH19Q8TAB3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 MEIS3P1-201ENST00000495167 958 ntBASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 AC239800.4-201ENST00000603712 296 ntBASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.02■□□□□ 0.16
PCDH19Q8TAB3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 ZBED1P1-201ENST00000502364 1930 ntBASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH19Q8TAB3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 SERBP1P5-201ENST00000510079 1181 ntBASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 AC105233.6-201ENST00000642093 218 ntBASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 LINC02228-204ENST00000642115 2962 ntBASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH19Q8TAB3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 AP000845.1-201ENST00000581677 2131 ntBASIC16■□□□□ 0.15
PCDH19Q8TAB3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms