Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 Z69890.1-201ENST00000382990 339 ntBASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 AC093909.3-201ENST00000504783 336 ntBASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 AC084752.1-201ENST00000509766 622 ntBASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 AP003398.1-201ENST00000531124 318 ntBASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 MT3-203ENST00000565838 421 ntTSL 3 BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 MARK2P16-201ENST00000605714 1723 ntBASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL22A1Q8NFW1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 HLA-DMA-203ENST00000395305 777 ntBASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 KRT17P4-201ENST00000429445 819 ntBASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL22A1Q8NFW1 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 GUSBP10-201ENST00000417412 665 ntBASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 DPY19L2P5-201ENST00000456300 331 ntBASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 AC007952.4-201ENST00000573866 637 ntBASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 MRPL37P1-201ENST00000592451 1337 ntBASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 AC002472.4-201ENST00000641915 272 ntBASIC20.01■□□□□ 0.79
COL22A1Q8NFW1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 AC244197.1-201ENST00000456494 951 ntBASIC20■□□□□ 0.79
COL22A1Q8NFW1 PGAM1P12-201ENST00000505622 748 ntBASIC20■□□□□ 0.79
COL22A1Q8NFW1 RPS23-204ENST00000507980 836 ntTSL 2 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC20■□□□□ 0.79
COL22A1Q8NFW1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
COL22A1Q8NFW1 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 FAM86KP-201ENST00000509817 987 ntBASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 AC012073.1-201ENST00000606114 1108 ntBASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 ZNF436-AS1-201ENST00000335648 2547 ntBASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL22A1Q8NFW1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms