Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 TSSK5P-201ENST00000423978 907 ntBASIC14.55□□□□□ -0.08
NUP43Q8NFH3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AC055876.3-201ENST00000431496 288 ntBASIC14.55□□□□□ -0.08
NUP43Q8NFH3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AC138649.4-201ENST00000612222 287 ntBASIC14.55□□□□□ -0.08
NUP43Q8NFH3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AC093512.1-201ENST00000617969 520 ntBASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AL390754.1-201ENST00000619088 582 ntBASIC14.55□□□□□ -0.08
NUP43Q8NFH3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AC138969.3-201ENST00000546612 1459 ntBASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AC138932.2-201ENST00000548268 1459 ntBASIC14.55□□□□□ -0.08
NUP43Q8NFH3 AC126755.4-201ENST00000549796 1459 ntBASIC14.55□□□□□ -0.08
NUP43Q8NFH3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP43Q8NFH3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 AGAP7P-201ENST00000582299 2062 ntBASIC14.54□□□□□ -0.08
NUP43Q8NFH3 AGAP14-201ENST00000624701 2060 ntBASIC14.54□□□□□ -0.08
NUP43Q8NFH3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 MYO15B-237ENST00000642007 4893 ntBASIC14.54□□□□□ -0.08
NUP43Q8NFH3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 AC106028.4-201ENST00000614509 607 ntBASIC14.54□□□□□ -0.08
NUP43Q8NFH3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 AC004461.2-201ENST00000629517 803 ntBASIC14.54□□□□□ -0.08
NUP43Q8NFH3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms