Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 AC138969.3-201ENST00000546612 1459 ntBASIC13.62□□□□□ -0.23
CPEB3Q8NE35 AC138932.2-201ENST00000548268 1459 ntBASIC13.62□□□□□ -0.23
CPEB3Q8NE35 AC126755.4-201ENST00000549796 1459 ntBASIC13.62□□□□□ -0.23
CPEB3Q8NE35 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 MEIS3P1-201ENST00000495167 958 ntBASIC13.62□□□□□ -0.23
CPEB3Q8NE35 SPCS2P1-201ENST00000561636 679 ntBASIC13.62□□□□□ -0.23
CPEB3Q8NE35 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 C18orf15-201ENST00000623680 2534 ntBASIC13.62□□□□□ -0.23
CPEB3Q8NE35 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPEB3Q8NE35 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 AL121723.1-201ENST00000445194 1519 ntBASIC13.61□□□□□ -0.23
CPEB3Q8NE35 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 BCRP1-201ENST00000444246 691 ntBASIC13.61□□□□□ -0.23
CPEB3Q8NE35 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 AC015910.1-201ENST00000579400 975 ntBASIC13.61□□□□□ -0.23
CPEB3Q8NE35 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 AC084364.1-201ENST00000551967 1556 ntBASIC13.61□□□□□ -0.23
CPEB3Q8NE35 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPEB3Q8NE35 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms