Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 KRT8P44-201ENST00000441609 1350 ntBASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 AC138035.3-201ENST00000622706 2791 ntBASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 TOMM22P5-201ENST00000416399 439 ntBASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 AC241585.1-201ENST00000433527 519 ntBASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 GPALPP1-207ENST00000611650 899 ntBASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 AC006058.4-201ENST00000624016 1670 ntBASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.32□□□□□ -0.44
TTC9CQ8N5M4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AC138969.2-201ENST00000532739 9932 ntBASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
TTC9CQ8N5M4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms