Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ENPP7P5-201ENST00000541031 1031 ntBASIC16.89■□□□□ 0.29
VPS52Q8N1B4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 MIR4525-201ENST00000580000 75 ntBASIC16.89■□□□□ 0.29
VPS52Q8N1B4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 INTS4P2-202ENST00000614726 2019 ntBASIC16.88■□□□□ 0.29
VPS52Q8N1B4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 RPL13AP25-201ENST00000484130 612 ntBASIC16.88■□□□□ 0.29
VPS52Q8N1B4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 PTP4A1P2-201ENST00000546033 454 ntBASIC16.88■□□□□ 0.29
VPS52Q8N1B4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS52Q8N1B4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 SOCS2P1-201ENST00000417727 557 ntBASIC16.87■□□□□ 0.29
VPS52Q8N1B4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 PHKG1P2-201ENST00000457537 863 ntBASIC16.87■□□□□ 0.29
VPS52Q8N1B4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 SLED1-202ENST00000512051 380 ntBASIC16.87■□□□□ 0.29
VPS52Q8N1B4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 AL583810.1-201ENST00000553344 1045 ntBASIC16.87■□□□□ 0.29
VPS52Q8N1B4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS52Q8N1B4 AC124283.3-201ENST00000570869 594 ntBASIC16.87■□□□□ 0.29
VPS52Q8N1B4 MIR4538-201ENST00000581377 78 ntBASIC16.87■□□□□ 0.29
VPS52Q8N1B4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms