Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.92■□□□□ 0.14
SIX5Q8N196 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.92■□□□□ 0.14
SIX5Q8N196 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
SIX5Q8N196 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.92■□□□□ 0.14
SIX5Q8N196 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.92■□□□□ 0.14
SIX5Q8N196 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SIX5Q8N196 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
SIX5Q8N196 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.92■□□□□ 0.14
SIX5Q8N196 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.92■□□□□ 0.14
SIX5Q8N196 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.92■□□□□ 0.14
SIX5Q8N196 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.92■□□□□ 0.14
SIX5Q8N196 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.92■□□□□ 0.14
SIX5Q8N196 POM121L10P-201ENST00000436994 1285 ntBASIC15.92■□□□□ 0.14
SIX5Q8N196 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.92■□□□□ 0.14
SIX5Q8N196 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.92■□□□□ 0.14
SIX5Q8N196 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.92■□□□□ 0.14
SIX5Q8N196 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.92■□□□□ 0.14
SIX5Q8N196 AC097724.1-201ENST00000609581 426 ntBASIC15.92■□□□□ 0.14
SIX5Q8N196 AC091812.3-201ENST00000621362 345 ntBASIC15.92■□□□□ 0.14
SIX5Q8N196 AC134407.2-201ENST00000625089 1978 ntBASIC15.92■□□□□ 0.14
SIX5Q8N196 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.92■□□□□ 0.14
SIX5Q8N196 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SIX5Q8N196 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX5Q8N196 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX5Q8N196 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX5Q8N196 AC005052.1-201ENST00000625181 2492 ntBASIC15.91■□□□□ 0.14
SIX5Q8N196 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.91■□□□□ 0.14
SIX5Q8N196 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 MIR769-201ENST00000390225 118 ntBASIC15.91■□□□□ 0.14
SIX5Q8N196 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.91■□□□□ 0.14
SIX5Q8N196 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 CYP46A4P-201ENST00000414953 267 ntBASIC15.91■□□□□ 0.14
SIX5Q8N196 CD8B2-202ENST00000417670 633 ntBASIC15.91■□□□□ 0.14
SIX5Q8N196 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 AL133466.1-201ENST00000447582 150 ntBASIC15.91■□□□□ 0.14
SIX5Q8N196 RN7SL720P-201ENST00000488178 304 ntBASIC15.91■□□□□ 0.14
SIX5Q8N196 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.91■□□□□ 0.14
SIX5Q8N196 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 ECM1P1-201ENST00000604092 1279 ntBASIC15.91■□□□□ 0.14
SIX5Q8N196 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX5Q8N196 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.91■□□□□ 0.14
SIX5Q8N196 MIR7845-201ENST00000618396 99 ntBASIC15.91■□□□□ 0.14
SIX5Q8N196 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX5Q8N196 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SIX5Q8N196 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX5Q8N196 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SIX5Q8N196 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SIX5Q8N196 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SIX5Q8N196 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.9■□□□□ 0.14
SIX5Q8N196 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX5Q8N196 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX5Q8N196 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms