Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL390955.2-201ENST00000603032 514 ntBASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 AC004461.2-201ENST00000629517 803 ntBASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 KRT8P44-201ENST00000441609 1350 ntBASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 AC148477.4-201ENST00000613430 1793 ntBASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 TOMM22P5-201ENST00000416399 439 ntBASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 ARL4AP4-201ENST00000434170 518 ntBASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 AC009477.1-201ENST00000452936 217 ntBASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 AC004890.2-204ENST00000481968 304 ntBASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC116Q8IYX3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 AC023024.2-201ENST00000623561 1993 ntBASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 AC126365.1-201ENST00000578585 1514 ntBASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms