Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 AC020914.3-201ENST00000594712 304 ntBASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 ENPP7P14-201ENST00000621765 1040 ntBASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS3Q8IXF0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 FNTAP2-201ENST00000430308 634 ntBASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 AC106872.11-201ENST00000605838 421 ntBASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 AL391005.1-201ENST00000623953 2435 ntBASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS3Q8IXF0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS3Q8IXF0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.96■□□□□ 0.14
NPAS3Q8IXF0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.14
NPAS3Q8IXF0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS3Q8IXF0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.96■□□□□ 0.14
NPAS3Q8IXF0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS3Q8IXF0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS3Q8IXF0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS3Q8IXF0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 AC092506.1-202ENST00000401022 528 ntBASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 AC005077.2-201ENST00000449786 690 ntBASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 HIST2H2BC-201ENST00000498492 580 ntBASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
NPAS3Q8IXF0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms